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Genoscope’s Resources

Organism	Project	Server	Article	Updating
Prokaryotes:		MaGe
Acinetobacter baylyi ADP1	Whole genome shotgun	GGB	2008	2008
Eukaryotes :
Arabidopsis thaliana	Chromosome 3	GGB	2000,	2000
	cDNA	GGB	2004	2004
Homo sapiens	Chromosome 14	GGB	2003	Fev. 2003
	Splicing alternatif	GGB	2006	Mai 2006
Oïkopleura dioica	Whole genome shotgun	GGB	2006	Fev. 2007
Paramecium tetraurelia	Whole genome shotgun	GGB	2006	Nov. 2006
Tetraodon nigroviridis	Whole genome shotgun	GGB	2004	Mars 2007
Vitis vinifera	Whole genome shotgun	GGB	2007	Sept.07
Tuber melanosporum	Whole genome shotgun	GGB	2010	Mar.2010

BLAST (Article, Link) for Basic Local Aligment Search Tool: A sequence comparison algorithm optimised for speed which is used to search sequence databases for optimal local alignments to a query.
BLAT (Article, lien) for Blast like alignment tool : An mRNA/DNA and cross-species protein sequence analysis tool to quickly find sequences of 95% and greater similarity of length 40 bases or more.
GGB for Generic Genome Browser (Article, Link): graphic interface for various databases (sequence, annotation, synténies...) for a given organism.
MaGe for Magnifying Microbial Genomes (Article, Link): annotation system for microbial genomes.

Last update on 15 April 2010

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